Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.32■□□□□ 0.68
Nfil3O08750 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nfil3O08750 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.32■□□□□ 0.68
Nfil3O08750 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nfil3O08750 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nfil3O08750 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nfil3O08750 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.31■□□□□ 0.68
Nfil3O08750 Gm6345-202ENSMUST00000180900 204 ntBASIC19.31■□□□□ 0.68
Nfil3O08750 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.31■□□□□ 0.68
Nfil3O08750 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfil3O08750 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Nfil3O08750 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nfil3O08750 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Nfil3O08750 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfil3O08750 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nfil3O08750 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.29■□□□□ 0.68
Nfil3O08750 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.29■□□□□ 0.68
Nfil3O08750 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nfil3O08750 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nfil3O08750 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nfil3O08750 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nfil3O08750 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.29■□□□□ 0.68
Nfil3O08750 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.29■□□□□ 0.68
Nfil3O08750 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nfil3O08750 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.28■□□□□ 0.68
Nfil3O08750 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Nfil3O08750 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Gm9013-201ENSMUST00000132939 882 ntBASIC19.28■□□□□ 0.68
Nfil3O08750 Gm25016-201ENSMUST00000158399 131 ntBASIC19.28■□□□□ 0.68
Nfil3O08750 Gm37722-201ENSMUST00000193757 208 ntBASIC19.28■□□□□ 0.68
Nfil3O08750 Gm5587-201ENSMUST00000206270 674 ntBASIC19.28■□□□□ 0.68
Nfil3O08750 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfil3O08750 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.28■□□□□ 0.68
Nfil3O08750 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.28■□□□□ 0.68
Nfil3O08750 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfil3O08750 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfil3O08750 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.27■□□□□ 0.68
Nfil3O08750 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nfil3O08750 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfil3O08750 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nfil3O08750 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfil3O08750 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nfil3O08750 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nfil3O08750 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.27■□□□□ 0.68
Nfil3O08750 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nfil3O08750 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms