Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Gm7461-201ENSMUST00000058918 827 ntBASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34bJ3QNR8 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34bJ3QNR8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34bJ3QNR8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.52■□□□□ 0.87
Trim34bJ3QNR8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim34bJ3QNR8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim34bJ3QNR8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Gm12895-201ENSMUST00000122214 226 ntBASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34bJ3QNR8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Gm34391-201ENSMUST00000203706 907 ntBASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34bJ3QNR8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim34bJ3QNR8 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms