Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm21788J3QNH3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm21788J3QNH3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm21788J3QNH3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm21788J3QNH3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gm21788J3QNH3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm21788J3QNH3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm21788J3QNH3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm21788J3QNH3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Gm21788J3QNH3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm21788J3QNH3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm21788J3QNH3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Gm12085-201ENSMUST00000119263 940 ntBASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Gm7638-201ENSMUST00000121348 967 ntBASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Gm38027-201ENSMUST00000192315 235 ntBASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.2□□□□□ -0.14
Gm21788J3QNH3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm21788J3QNH3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Gm10653-202ENSMUST00000139570 835 ntBASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Il3ra-202ENSMUST00000223589 738 ntBASIC14.19□□□□□ -0.14
Gm21788J3QNH3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm21788J3QNH3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Gm13168-201ENSMUST00000121771 632 ntBASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm21788J3QNH3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm21788J3QNH3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm21788J3QNH3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm21788J3QNH3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm21788J3QNH3 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.17□□□□□ -0.14
Gm21788J3QNH3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm21788J3QNH3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms