Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh1F7BJK1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Gm4974-201ENSMUST00000209974 875 ntBASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh1F7BJK1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Gm18025-201ENSMUST00000221733 862 ntBASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh1F7BJK1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh1F7BJK1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh1F7BJK1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms