Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm10566-201ENSMUST00000086739 996 ntBASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.25□□□□□ -0.13
Cpsf4lE9Q2N0 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Mir7071-201ENSMUST00000184847 69 ntBASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cpsf4lE9Q2N0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Gm13186-201ENSMUST00000118031 316 ntBASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cpsf4lE9Q2N0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Mir1668-201ENSMUST00000184114 107 ntBASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Phf7-203ENSMUST00000226565 1971 ntBASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.22□□□□□ -0.13
Cpsf4lE9Q2N0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4lE9Q2N0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms