Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Gm12527-201ENSMUST00000117967 564 ntBASIC14.3□□□□□ -0.12
BC035044E0CXF8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
BC035044E0CXF8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Gm37856-201ENSMUST00000191634 999 ntBASIC14.29□□□□□ -0.12
BC035044E0CXF8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC035044E0CXF8 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.29□□□□□ -0.12
BC035044E0CXF8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
BC035044E0CXF8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
BC035044E0CXF8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BC035044E0CXF8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC035044E0CXF8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC035044E0CXF8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC035044E0CXF8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC035044E0CXF8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC035044E0CXF8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
BC035044E0CXF8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC035044E0CXF8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC035044E0CXF8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
BC035044E0CXF8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC035044E0CXF8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.27□□□□□ -0.13
BC035044E0CXF8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
BC035044E0CXF8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC035044E0CXF8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms