Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shank1D3YZU1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.02□□□□□ -0.01
Shank1D3YZU1 Gm4995-201ENSMUST00000117247 432 ntBASIC15.02□□□□□ -0.01
Shank1D3YZU1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shank1D3YZU1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shank1D3YZU1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shank1D3YZU1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.02□□□□□ -0.01
Shank1D3YZU1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Gm27000-201ENSMUST00000182943 842 ntBASIC15.01□□□□□ -0.01
Shank1D3YZU1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shank1D3YZU1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Shank1D3YZU1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Shank1D3YZU1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15□□□□□ -0.01
Shank1D3YZU1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15□□□□□ -0.01
Shank1D3YZU1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15□□□□□ -0.01
Shank1D3YZU1 Gm43575-201ENSMUST00000196420 516 ntBASIC15□□□□□ -0.01
Shank1D3YZU1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Shank1D3YZU1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15□□□□□ -0.01
Shank1D3YZU1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15□□□□□ -0.01
Shank1D3YZU1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Shank1D3YZU1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 AC108846.1-201ENSMUST00000214531 513 ntBASIC15□□□□□ -0.01
Shank1D3YZU1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shank1D3YZU1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.99□□□□□ -0.01
Shank1D3YZU1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Gm13186-201ENSMUST00000118031 316 ntBASIC14.99□□□□□ -0.01
Shank1D3YZU1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Gm10060-201ENSMUST00000212002 111 ntBASIC14.99□□□□□ -0.01
Shank1D3YZU1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.99□□□□□ -0.01
Shank1D3YZU1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.98□□□□□ -0.01
Shank1D3YZU1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm6296-201ENSMUST00000222599 943 ntBASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shank1D3YZU1 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms