Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rfx8D3YU81 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.82■□□□□ 0.44
Rfx8D3YU81 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.81■□□□□ 0.44
Rfx8D3YU81 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx8D3YU81 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.81■□□□□ 0.44
Rfx8D3YU81 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.8■□□□□ 0.44
Rfx8D3YU81 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.8■□□□□ 0.44
Rfx8D3YU81 Gm7889-201ENSMUST00000185591 958 ntBASIC17.8■□□□□ 0.44
Rfx8D3YU81 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx8D3YU81 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Gm13216-201ENSMUST00000117145 591 ntBASIC17.79■□□□□ 0.44
Rfx8D3YU81 Gm18959-201ENSMUST00000208954 655 ntBASIC17.79■□□□□ 0.44
Rfx8D3YU81 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx8D3YU81 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfx8D3YU81 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.78■□□□□ 0.44
Rfx8D3YU81 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rfx8D3YU81 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Gm27000-201ENSMUST00000182943 842 ntBASIC17.77■□□□□ 0.44
Rfx8D3YU81 Gm45058-201ENSMUST00000205810 766 ntBASIC17.77■□□□□ 0.44
Rfx8D3YU81 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx8D3YU81 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rfx8D3YU81 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfx8D3YU81 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Rfx8D3YU81 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rfx8D3YU81 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx8D3YU81 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms