Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt28A6BLY7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Krt28A6BLY7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt28A6BLY7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Krt28A6BLY7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt28A6BLY7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt28A6BLY7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt28A6BLY7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt28A6BLY7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt28A6BLY7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Gm25990-201ENSMUST00000102440 86 ntBASIC18.63■□□□□ 0.57
Krt28A6BLY7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Gm25745-201ENSMUST00000174945 133 ntBASIC18.63■□□□□ 0.57
Krt28A6BLY7 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.63■□□□□ 0.57
Krt28A6BLY7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.63■□□□□ 0.57
Krt28A6BLY7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt28A6BLY7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Gm13418-201ENSMUST00000119097 944 ntBASIC18.62■□□□□ 0.57
Krt28A6BLY7 Gm15173-201ENSMUST00000122049 433 ntBASIC18.62■□□□□ 0.57
Krt28A6BLY7 Gm4535-201ENSMUST00000182274 558 ntBASIC18.62■□□□□ 0.57
Krt28A6BLY7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.62■□□□□ 0.57
Krt28A6BLY7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Gm10355-201ENSMUST00000097146 517 ntBASIC18.62■□□□□ 0.57
Krt28A6BLY7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt28A6BLY7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.61■□□□□ 0.57
Krt28A6BLY7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Gm10576-201ENSMUST00000191927 825 ntBASIC18.61■□□□□ 0.57
Krt28A6BLY7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Krt28A6BLY7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.61■□□□□ 0.57
Krt28A6BLY7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt28A6BLY7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms