Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm29707-201ENSMUST00000196325 491 ntBASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm18421-201ENSMUST00000204122 625 ntBASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3854A0A1B0GSS6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3854A0A1B0GSS6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gm3854A0A1B0GSS6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3854A0A1B0GSS6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.77■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm12644-201ENSMUST00000119935 606 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms