Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ccdc194A0A140LIT1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc194A0A140LIT1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Gm10698-201ENSMUST00000182663 604 ntBASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc194A0A140LIT1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc194A0A140LIT1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms