Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38027-201ENSMUST00000192315 235 ntBASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Il3ra-202ENSMUST00000223589 738 ntBASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms