Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm6420-201ENSMUST00000193885 723 ntBASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm10418-201ENSMUST00000100943 576 ntBASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9d-4A0A0G2JG37 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9d-4A0A0G2JG37 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-4A0A0G2JG37 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms