Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Smad6-203ENSMUST00000179458 273 ntBASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC10.61□□□□□ -0.71
Igkv8-27A0A0G2JF28 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gm43072-201ENSMUST00000200283 1671 ntBASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Igkv8-27A0A0G2JF28 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Igkv8-27A0A0G2JF28 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-27A0A0G2JF28 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms