Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Gm15375-201ENSMUST00000119510 849 ntBASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav19A0A0B4J1K4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav19A0A0B4J1K4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav19A0A0B4J1K4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav19A0A0B4J1K4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav19A0A0B4J1K4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav19A0A0B4J1K4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav19A0A0B4J1K4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Mir5133-201ENSMUST00000174955 77 ntBASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav19A0A0B4J1K4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav19A0A0B4J1K4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms