Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mir7071-201ENSMUST00000184847 69 ntBASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-4A0A0B4J1K2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm27000-201ENSMUST00000182943 842 ntBASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9-4A0A0B4J1K2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Trav9-4A0A0B4J1K2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.61□□□□□ -0.39
Trav9-4A0A0B4J1K2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms