Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.62□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-5A0A075B6B9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm26524-201ENSMUST00000192339 390 ntBASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-5A0A075B6B9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm15375-201ENSMUST00000119510 849 ntBASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm5408-201ENSMUST00000197998 747 ntBASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6d-5A0A075B6B9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6d-5A0A075B6B9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6d-5A0A075B6B9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6d-5A0A075B6B9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms