Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdv1A0A075B657 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdv1A0A075B657 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdv1A0A075B657 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdv1A0A075B657 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdv1A0A075B657 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trdv1A0A075B657 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trdv1A0A075B657 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Dancr-204ENSMUST00000132389 2347 ntBASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Gm42569-201ENSMUST00000200539 472 ntBASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdv1A0A075B657 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trdv1A0A075B657 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Trdv1A0A075B657 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trdv1A0A075B657 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdv1A0A075B657 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Gm26571-201ENSMUST00000181399 666 ntBASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.82□□□□□ -0.36
Trdv1A0A075B657 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.82□□□□□ -0.36
Trdv1A0A075B657 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdv1A0A075B657 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Gm4974-201ENSMUST00000209974 875 ntBASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.81□□□□□ -0.36
Trdv1A0A075B657 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms