Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Gm8493-201ENSMUST00000196881 489 ntBASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav8-1A0A075B641 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav8-1A0A075B641 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav8-1A0A075B641 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms