Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16d-dv11A0A075B617 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav16d-dv11A0A075B617 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav16d-dv11A0A075B617 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16d-dv11A0A075B617 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav16d-dv11A0A075B617 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms