Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav1A0A075B5Z4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav1A0A075B5Z4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Mir5122-201ENSMUST00000175004 89 ntBASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav1A0A075B5Z4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav1A0A075B5Z4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav1A0A075B5Z4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav1A0A075B5Z4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms