Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 RPSAP39-201ENST00000467439 883 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 RN7SL717P-201ENST00000478343 297 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 RPL7P6-201ENST00000480903 738 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 NPM1P28-201ENST00000492269 840 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 RNU6-941P-201ENST00000516346 108 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC126177.5-201ENST00000549599 178 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC090888.3-201ENST00000558917 509 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC005840.5-201ENST00000619166 599 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 MTCO1P7-201ENST00000419523 1542 ntBASIC5□□□□□ -1.61
VPS29Q9UBQ0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VPS29Q9UBQ0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5□□□□□ -1.61
VPS29Q9UBQ0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 RNA5SP90-201ENST00000364801 99 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC093655.2-201ENST00000425735 631 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC002069.1-201ENST00000429649 1159 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC079807.1-201ENST00000429993 481 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 RPS29P10-201ENST00000439197 166 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 CYCSP24-201ENST00000445119 316 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC245028.2-201ENST00000458673 253 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC023141.9-201ENST00000458734 412 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 RN7SL184P-201ENST00000488308 297 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 NIFKP7-201ENST00000503365 834 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC020978.7-201ENST00000575953 1187 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC008833.1-201ENST00000611633 691 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AL359513.1-201ENST00000614364 557 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC007204.2-201ENST00000615022 616 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 AC135068.12-201ENST00000637370 931 ntBASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS29Q9UBQ0 PROS2P-201ENST00000474651 1951 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AL390316.1-201ENST00000406279 553 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 TCEA1P3-201ENST00000443005 880 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC144530.1-201ENST00000452862 555 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 SNORD95-201ENST00000579879 68 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC107993.1-201ENST00000591343 684 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 Z95327.3-201ENST00000610385 572 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC004477.3-201ENST00000614061 590 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 AC026124.2-201ENST00000621847 656 ntBASIC4.98□□□□□ -1.61
VPS29Q9UBQ0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms