Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC087672.1-201ENST00000479876 766 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AP001804.2-201ENST00000533932 910 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC106734.1-201ENST00000568646 663 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 MIR4660-201ENST00000583549 74 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL591167.1-201ENST00000607321 456 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 VN1R9P-201ENST00000614184 867 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC231759.1-201ENST00000616455 597 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 MIR6721-201ENST00000617181 87 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 MIR6778-201ENST00000617912 73 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL137067.2-201ENST00000621202 131 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AP003485.2-201ENST00000623636 610 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AP002967.1-201ENST00000624203 539 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AP001052.1-201ENST00000626421 99 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL121839.2-201ENST00000565058 6943 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL591135.1-201ENST00000401578 5914 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX18Q96RF0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AL355578.1-201ENST00000607405 1328 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX18Q96RF0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 RPL11P4-201ENST00000332269 436 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX18Q96RF0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC003045.1-201ENST00000398779 713 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 CBX1P3-201ENST00000413296 527 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 Z68694.1-201ENST00000413929 841 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 PTCD2P2-201ENST00000415579 1095 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 IGLV3-4-201ENST00000432300 244 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AL731534.1-201ENST00000434711 269 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC099670.2-201ENST00000435130 321 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNX18Q96RF0 VN1R25P-201ENST00000443385 738 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 COX4I1P2-201ENST00000447446 547 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 HPRT1P1-201ENST00000509498 657 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AL359219.2-201ENST00000555184 348 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC027455.1-201ENST00000574104 594 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 SUMO2P14-201ENST00000604488 293 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 Z82195.1-201ENST00000604558 398 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AL499605.1-201ENST00000604628 403 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC073387.2-201ENST00000604797 784 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 RMST_10.1-201ENST00000616309 154 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC021755.4-201ENST00000616620 456 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC008115.4-201ENST00000619780 775 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC111152.1-202ENST00000635848 339 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.51□□□□□ -1.53
SNX18Q96RF0 AP003399.1-201ENST00000637534 361 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC079776.5-201ENST00000641920 211 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 MTCO1P28-201ENST00000574177 1528 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 AC114774.1-201ENST00000507410 1770 ntBASIC5.51□□□□□ -1.53
SNX18Q96RF0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNX18Q96RF0 MAPK10-328ENST00000641553 4009 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms