Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 PRPF38AP1-201ENST00000451976 933 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 RN7SL319P-201ENST00000480656 221 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC106806.2-201ENST00000509365 500 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 ERG-205ENST00000398910 4954 ntTSL 5 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AP001029.2-203ENST00000589795 4910 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 OR1H1P-201ENST00000448731 937 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC073073.1-201ENST00000493920 463 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 RPL7P50-201ENST00000600588 727 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AL133481.2-203ENST00000607558 139 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC004836.1-201ENST00000623032 634 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC074101.1-201ENST00000637861 241 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 RPS17P17-201ENST00000419392 409 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 MIR3200-201ENST00000580767 85 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 AC017104.4-201ENST00000636283 1592 ntBASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CSMD1Q96PZ7 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 RNU1-136P-201ENST00000384181 164 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC233289.1-201ENST00000403700 508 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AL354766.1-201ENST00000423396 542 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 RPS4XP16-201ENST00000427198 791 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 ENPP7P9-201ENST00000514456 627 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AL353729.2-201ENST00000605859 1249 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AL035461.2-201ENST00000619201 524 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 OR4F13P-202ENST00000560066 2054 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AL358176.3-201ENST00000420757 454 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC079922.1-201ENST00000443291 359 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC093840.1-201ENST00000511599 336 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC090948.1-201ENST00000607464 549 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AL731566.1-201ENST00000620490 1937 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms