Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC015799.1-201ENST00000622996 3122 ntBASIC5.48□□□□□ -1.53
RAE1P78406 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.48□□□□□ -1.53
RAE1P78406 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RAE1P78406 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.48□□□□□ -1.53
RAE1P78406 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.48□□□□□ -1.53
RAE1P78406 PDZK1P1-202ENST00000425209 1350 ntBASIC5.48□□□□□ -1.53
RAE1P78406 RNU6-1005P-201ENST00000384519 107 ntBASIC5.48□□□□□ -1.53
RAE1P78406 MIR130A-201ENST00000385274 89 ntBASIC5.48□□□□□ -1.53
RAE1P78406 RPL5P19-201ENST00000404228 893 ntBASIC5.48□□□□□ -1.53
RAE1P78406 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.48□□□□□ -1.53
RAE1P78406 UBE2V1P11-201ENST00000411559 285 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AL592310.1-201ENST00000414330 671 ntBASIC5.48□□□□□ -1.53
RAE1P78406 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.48□□□□□ -1.53
RAE1P78406 VPS26BP1-201ENST00000417155 755 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.48□□□□□ -1.53
RAE1P78406 EIF4A1P1-201ENST00000420241 934 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC009506.2-201ENST00000420635 840 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.48□□□□□ -1.53
RAE1P78406 SNRPFP2-201ENST00000440710 251 ntBASIC5.48□□□□□ -1.53
RAE1P78406 EIF5AP4-201ENST00000441206 465 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.48□□□□□ -1.53
RAE1P78406 CYCSP42-201ENST00000450823 238 ntBASIC5.48□□□□□ -1.53
RAE1P78406 METTL15P1-201ENST00000481421 1045 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC099521.1-201ENST00000482557 334 ntBASIC5.48□□□□□ -1.53
RAE1P78406 RPS7P6-201ENST00000485777 579 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC005412.2-201ENST00000492004 341 ntBASIC5.48□□□□□ -1.53
RAE1P78406 DUTP1-201ENST00000493631 470 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.48□□□□□ -1.53
RAE1P78406 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.48□□□□□ -1.53
RAE1P78406 GAPDHP71-201ENST00000511530 1003 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.48□□□□□ -1.53
RAE1P78406 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.48□□□□□ -1.53
RAE1P78406 OR5H7P-201ENST00000514084 930 ntBASIC5.48□□□□□ -1.53
RAE1P78406 Y_RNA.667-201ENST00000516212 107 ntBASIC5.48□□□□□ -1.53
RAE1P78406 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.48□□□□□ -1.53
RAE1P78406 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.48□□□□□ -1.53
RAE1P78406 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.48□□□□□ -1.53
RAE1P78406 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 AC002310.3-201ENST00000569728 723 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.48□□□□□ -1.53
RAE1P78406 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.48□□□□□ -1.53
RAE1P78406 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.48□□□□□ -1.53
RAE1P78406 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.48□□□□□ -1.53
RAE1P78406 AC234772.3-201ENST00000602277 528 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC022022.2-201ENST00000602989 360 ntBASIC5.48□□□□□ -1.53
RAE1P78406 SUMO2P14-201ENST00000604488 293 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AL450336.1-201ENST00000605180 586 ntBASIC5.48□□□□□ -1.53
RAE1P78406 RNU6-84P-201ENST00000607737 102 ntBASIC5.48□□□□□ -1.53
RAE1P78406 MIR6780B-201ENST00000610307 79 ntBASIC5.48□□□□□ -1.53
RAE1P78406 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC015712.7-201ENST00000615211 635 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AC068057.2-201ENST00000624047 895 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.48□□□□□ -1.53
RAE1P78406 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.48□□□□□ -1.53
RAE1P78406 AC079776.5-201ENST00000641920 211 ntBASIC5.48□□□□□ -1.53
RAE1P78406 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.48□□□□□ -1.53
RAE1P78406 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 AC123769.1-201ENST00000530992 3192 ntBASIC5.48□□□□□ -1.53
RAE1P78406 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.48□□□□□ -1.53
RAE1P78406 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 AC114774.1-201ENST00000507410 1770 ntBASIC5.47□□□□□ -1.53
RAE1P78406 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RAE1P78406 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 RNU1-150P-201ENST00000362491 162 ntBASIC5.47□□□□□ -1.53
RAE1P78406 RNA5SP105-201ENST00000391123 113 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.47□□□□□ -1.53
RAE1P78406 HIGD1AP15-201ENST00000416198 280 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 RNGTTP1-201ENST00000420965 728 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AC006065.1-201ENST00000422539 802 ntBASIC5.47□□□□□ -1.53
RAE1P78406 NANOGP5-201ENST00000424456 877 ntBASIC5.47□□□□□ -1.53
RAE1P78406 BX323845.3-201ENST00000428215 527 ntBASIC5.47□□□□□ -1.53
RAE1P78406 NDUFA5P10-201ENST00000432147 357 ntBASIC5.47□□□□□ -1.53
RAE1P78406 Z84478.1-201ENST00000438230 1219 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.47□□□□□ -1.53
RAE1P78406 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 AC023512.1-201ENST00000444513 499 ntBASIC5.47□□□□□ -1.53
RAE1P78406 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.47□□□□□ -1.53
RAE1P78406 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAE1P78406 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.47□□□□□ -1.53
RAE1P78406 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.47□□□□□ -1.53
RAE1P78406 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.47□□□□□ -1.53
RAE1P78406 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms