Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL158211.1-201ENST00000566763 763 ntBASIC6.81□□□□□ -1.32
COL3A1P02461 MTND1P8-201ENST00000571424 950 ntBASIC6.81□□□□□ -1.32
COL3A1P02461 AC005377.1-201ENST00000605126 456 ntBASIC6.81□□□□□ -1.32
COL3A1P02461 AC005972.3-201ENST00000606304 481 ntBASIC6.81□□□□□ -1.32
COL3A1P02461 AC116651.1-201ENST00000609724 556 ntBASIC6.81□□□□□ -1.32
COL3A1P02461 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.81□□□□□ -1.32
COL3A1P02461 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.81□□□□□ -1.32
COL3A1P02461 AC006927.4-201ENST00000639187 543 ntBASIC6.81□□□□□ -1.32
COL3A1P02461 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL3A1P02461 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL3A1P02461 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.81□□□□□ -1.32
COL3A1P02461 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL3A1P02461 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.81□□□□□ -1.32
COL3A1P02461 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL3A1P02461 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL3A1P02461 AC092451.3-201ENST00000625067 1343 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
COL3A1P02461 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL3A1P02461 SNORA2.3-201ENST00000383920 135 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.8□□□□□ -1.32
COL3A1P02461 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.8□□□□□ -1.32
COL3A1P02461 MTATP6P17-201ENST00000431030 672 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.8□□□□□ -1.32
COL3A1P02461 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.8□□□□□ -1.32
COL3A1P02461 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.8□□□□□ -1.32
COL3A1P02461 AC105420.1-201ENST00000504389 582 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 AC010350.1-201ENST00000504908 231 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 MRPS33P2-201ENST00000507850 322 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 AC147055.3-201ENST00000510547 851 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 OR7E128P-201ENST00000532736 1024 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 SNRPGP1-201ENST00000553864 222 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 AC019322.1-201ENST00000571869 389 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.8□□□□□ -1.32
COL3A1P02461 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL3A1P02461 AC090506.2-201ENST00000624521 419 ntBASIC6.8□□□□□ -1.32
COL3A1P02461 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL3A1P02461 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL3A1P02461 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.8□□□□□ -1.32
COL3A1P02461 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL3A1P02461 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL3A1P02461 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
COL3A1P02461 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL3A1P02461 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL3A1P02461 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
COL3A1P02461 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL3A1P02461 OR1L6-202ENST00000373684 1044 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 OR8V1P-201ENST00000395193 873 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.79□□□□□ -1.32
COL3A1P02461 VN1R54P-201ENST00000435210 1049 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC016559.2-201ENST00000510759 359 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 SCARNA9-201ENST00000530422 353 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 AC007423.1-201ENST00000605009 627 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC034229.4-201ENST00000607861 441 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC109809.1-201ENST00000619665 545 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 AC023510.2-201ENST00000622162 746 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
COL3A1P02461 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL3A1P02461 MFSD8-216ENST00000641147 4009 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL3A1P02461 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL3A1P02461 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.79□□□□□ -1.32
COL3A1P02461 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL3A1P02461 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL3A1P02461 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL3A1P02461 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL3A1P02461 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL3A1P02461 RNA5SP123-201ENST00000363244 119 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 RNA5SP514-201ENST00000363717 111 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AL353625.1-202ENST00000366273 571 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 SNORA40.4-201ENST00000390971 128 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC068138.1-201ENST00000412635 217 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AL590762.4-201ENST00000425885 253 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.79□□□□□ -1.32
COL3A1P02461 BTBD7P2-201ENST00000441962 620 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC092647.3-201ENST00000443044 633 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 OR7E125P-201ENST00000443450 846 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 TCEA1P1-201ENST00000449716 880 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC018635.1-201ENST00000468292 1030 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 HMGN2P25-201ENST00000486956 268 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.79□□□□□ -1.32
COL3A1P02461 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.79□□□□□ -1.32
COL3A1P02461 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.79□□□□□ -1.32
COL3A1P02461 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL3A1P02461 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL3A1P02461 AC126365.2-201ENST00000580630 379 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.79□□□□□ -1.32
COL3A1P02461 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.79□□□□□ -1.32
COL3A1P02461 AC009950.2-201ENST00000636548 183 ntBASIC6.79□□□□□ -1.32
COL3A1P02461 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.78□□□□□ -1.32
COL3A1P02461 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.78□□□□□ -1.32
COL3A1P02461 ADAM24P-201ENST00000398655 2101 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms