Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 DDX39BP1-205ENST00000422507 192 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 REG1CP-206ENST00000447469 496 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 HMGN2P25-201ENST00000486956 268 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AP000676.2-201ENST00000529711 301 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC105036.1-201ENST00000566222 271 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC119501.1-201ENST00000603646 475 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC063952.1-203ENST00000634410 658 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC006210.2-201ENST00000367074 1545 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 AC139426.3-201ENST00000605648 2059 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 NXF4-202ENST00000416098 1465 ntBASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SMIM28A0A1B0GU29 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 NR1H5P-201ENST00000452683 1377 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 RNA5SP123-201ENST00000363244 119 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 RNA5SP455-201ENST00000365190 119 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 MIR937-201ENST00000401271 86 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AL078599.1-201ENST00000402075 293 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AL354868.1-201ENST00000417077 482 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 RPS26P13-201ENST00000419030 330 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 RPL19P16-201ENST00000433839 588 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AC090018.1-201ENST00000434369 367 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 MED28P3-201ENST00000444288 531 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 OR5AZ1P-201ENST00000527448 943 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 MIR4420-201ENST00000583944 77 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AL627230.1-201ENST00000613077 211 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AL162574.1-201ENST00000615702 950 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AL591926.8-201ENST00000616876 211 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 MIR6839-201ENST00000620425 113 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AC112255.1-201ENST00000624070 2493 ntBASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMIM28A0A1B0GU29 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AL138820.1-201ENST00000617901 5305 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 RN7SKP104-201ENST00000362605 328 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 RHOT1P3-201ENST00000436571 331 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 NDUFA5P8-201ENST00000449019 346 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC020779.1-201ENST00000478757 796 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 RPL37AP8-201ENST00000494116 276 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 IMPA1P1-201ENST00000510718 842 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 RN7SKP260-201ENST00000516907 149 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC092709.1-201ENST00000521355 1045 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 MIR4691-201ENST00000583764 85 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AP005432.2-201ENST00000608162 586 ntBASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms