Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CISHQ9NSE2 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 NLRP3P1-201ENST00000622303 1785 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 SMG1P7-201ENST00000565246 2704 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 AC004158.1-201ENST00000564508 4319 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 SNORA5.1-201ENST00000384275 131 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 RN7SKP126-201ENST00000411143 300 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AL389915.2-201ENST00000454576 441 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 AC097173.1-201ENST00000505862 819 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 RNA5SP34-201ENST00000516887 130 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 PRPF19P1-201ENST00000584766 898 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 AP000894.4-201ENST00000610185 483 ntBASIC5.53□□□□□ -1.52
CISHQ9NSE2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CISHQ9NSE2 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CISHQ9NSE2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CISHQ9NSE2 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.53□□□□□ -1.52
CISHQ9NSE2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CISHQ9NSE2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CISHQ9NSE2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 ZNF402P-201ENST00000404435 3100 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 MARK2P12-201ENST00000420129 585 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 BX510359.3-201ENST00000422168 306 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AL139148.1-201ENST00000427122 680 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC009238.2-201ENST00000431026 355 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC046176.1-201ENST00000435260 1170 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AURKAPS1-201ENST00000451805 1212 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC018638.3-201ENST00000461273 132 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC020779.1-201ENST00000478757 796 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 RN7SL629P-201ENST00000489622 285 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 RNA5SP92-201ENST00000516437 110 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 BNIP3P35-201ENST00000604530 490 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AP005432.2-201ENST00000608162 586 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 AC063952.1-203ENST00000634410 658 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.52□□□□□ -1.53
CISHQ9NSE2 CCAT2-201ENST00000630920 1752 ntBASIC5.52□□□□□ -1.53
CISHQ9NSE2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CISHQ9NSE2 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 MIR133A2-201ENST00000347538 102 ntBASIC5.51□□□□□ -1.53
CISHQ9NSE2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 AL390316.1-201ENST00000406279 553 ntBASIC5.51□□□□□ -1.53
CISHQ9NSE2 PRPF38AP1-201ENST00000451976 933 ntBASIC5.51□□□□□ -1.53
CISHQ9NSE2 SNRPCP2-201ENST00000504370 475 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms