Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 AC232271.1-201ENST00000602455 2715 ntBASIC4.95□□□□□ -1.62
CHD8Q9HCK8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CHD8Q9HCK8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC097721.1-201ENST00000427150 1253 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 RPS4XP16-201ENST00000427198 791 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 OR4C10P-201ENST00000434991 931 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC005154.2-201ENST00000438110 379 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 NDUFA5P8-201ENST00000449019 346 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 OR52A4P-201ENST00000472867 958 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 RN7SL165P-201ENST00000477476 291 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC093827.1-201ENST00000480094 861 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 RNU1-45P-201ENST00000517191 141 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 MRPL49P2-201ENST00000521066 465 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AP005901.4-201ENST00000577336 569 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 RN7SL435P-201ENST00000584418 282 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 AC008739.3-201ENST00000603262 127 ntBASIC4.94□□□□□ -1.62
CHD8Q9HCK8 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD8Q9HCK8 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AP002991.2-201ENST00000623807 2801 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 MIR551A-201ENST00000385042 96 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 RPL36AP15-201ENST00000444514 266 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AC007996.1-201ENST00000620414 2821 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 CAST-222ENST00000508579 1758 ntTSL 2 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 OR52B5P-204ENST00000641744 3467 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 OR4K15-201ENST00000305051 1216 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 OR6C69P-201ENST00000394268 893 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 NDUFB4P4-201ENST00000404822 243 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AC236972.1-201ENST00000433225 199 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AK3P4-201ENST00000504283 583 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 YWHABP2-201ENST00000540201 713 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 RPL21P12-201ENST00000559810 515 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AL513548.2-201ENST00000602994 1207 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AC024589.2-201ENST00000605642 1294 ntBASIC4.93□□□□□ -1.62
CHD8Q9HCK8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD8Q9HCK8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms