Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL035660.1-201ENST00000422041 222 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 OR7L1P-201ENST00000456181 380 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AC068228.1-201ENST00000461723 211 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 CBX1P5-201ENST00000475330 559 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AC093827.1-201ENST00000480094 861 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 RN7SL814P-201ENST00000487715 300 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 LSM3P4-201ENST00000502948 309 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AC011840.5-201ENST00000582125 771 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AC009027.1-201ENST00000604510 479 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AC020658.4-201ENST00000613987 684 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AC007204.1-201ENST00000621794 555 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 MTCO1P8-201ENST00000416914 1523 ntBASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC28BQ9BUN5 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC28BQ9BUN5 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.21□□□□□ -1.57
CCDC28BQ9BUN5 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC28BQ9BUN5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC28BQ9BUN5 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 RN7SKP6-201ENST00000364795 319 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 RMRPP5-201ENST00000411156 267 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AL358176.3-201ENST00000420757 454 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 BX323845.3-201ENST00000428215 527 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AL354893.1-201ENST00000433735 348 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 OR6D1P-201ENST00000436165 939 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 DNAJB5P1-201ENST00000454004 806 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AL035090.1-201ENST00000454835 332 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 CEACAMP11-201ENST00000455211 583 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AL445433.1-201ENST00000457507 257 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 RPS23P6-201ENST00000466136 431 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC092754.1-201ENST00000472975 479 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 Y_RNA.667-201ENST00000516212 107 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 RN7SL52P-201ENST00000584271 284 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 RN7SL787P-201ENST00000613000 284 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC037198.3-201ENST00000616754 526 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 MRE11P1-201ENST00000464884 2127 ntBASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CCDC28BQ9BUN5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 TMSB4XP2-201ENST00000335179 210 ntBASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 MIR191-201ENST00000384873 92 ntBASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 AL359885.1-201ENST00000415786 903 ntBASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 VN1R3-201ENST00000418822 919 ntBASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC28BQ9BUN5 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms