Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC079905.1-201ENST00000549280 475 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CL1P78423 GLRXP2-201ENST00000555594 321 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
CX3CL1P78423 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 AC019322.1-201ENST00000571869 389 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 TXNP4-201ENST00000575018 310 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 MIR4776-2-201ENST00000580204 80 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AP003117.1-201ENST00000602771 554 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.69□□□□□ -1.66
CX3CL1P78423 BNIP3P35-201ENST00000604530 490 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AC145423.1-201ENST00000605712 336 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.69□□□□□ -1.66
CX3CL1P78423 MIR6809-201ENST00000612189 116 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.69□□□□□ -1.66
CX3CL1P78423 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CX3CL1P78423 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 IFIT1P1-201ENST00000400497 1449 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CX3CL1P78423 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 ZNF733P-202ENST00000444809 1573 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CX3CL1P78423 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CX3CL1P78423 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.69□□□□□ -1.66
CX3CL1P78423 AC005224.3-201ENST00000584683 2140 ntBASIC4.69□□□□□ -1.66
CX3CL1P78423 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 AL022311.1-201ENST00000623726 19416 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 AP005435.3-201ENST00000531260 3198 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AL161756.3-201ENST00000641216 2071 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 HSPA8P19-201ENST00000505359 1517 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CX3CL1P78423 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CX3CL1P78423 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CX3CL1P78423 RNA5SP433-201ENST00000364491 114 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 RNU6-1005P-201ENST00000384519 107 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 RNU6-244P-201ENST00000391028 104 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC004386.1-201ENST00000393214 761 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AL136131.1-201ENST00000406079 803 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AL034374.1-201ENST00000406329 351 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AC010385.1-201ENST00000412374 256 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 METTL15P3-201ENST00000415522 1221 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 BX664727.1-201ENST00000416024 466 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 RPL24P2-201ENST00000421023 475 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CL1P78423 NPM1P18-201ENST00000434232 732 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 CACYBPP1-201ENST00000438592 684 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 RPS27P5-201ENST00000444247 244 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AL096829.2-201ENST00000446582 742 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 CST12P-201ENST00000457644 362 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 CYCSP20-201ENST00000473154 315 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC099521.1-201ENST00000482557 334 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 RPL38P3-201ENST00000484463 213 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CL1P78423 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CX3CL1P78423 RPEP1-201ENST00000504507 658 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AC133963.2-201ENST00000513686 578 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AP003355.1-201ENST00000518956 587 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC013701.1-201ENST00000522657 465 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AC027369.2-201ENST00000528030 440 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.68□□□□□ -1.66
CX3CL1P78423 OR4A43P-201ENST00000532938 908 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AC107958.1-201ENST00000556576 290 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CL1P78423 GARSP1-201ENST00000570895 719 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AL391834.2-201ENST00000609982 546 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 MIR6793-201ENST00000612376 63 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC005156.1-201ENST00000613371 573 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AC004477.3-201ENST00000614061 590 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AL139099.4-201ENST00000614802 114 ntBASIC4.68□□□□□ -1.66
CX3CL1P78423 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.68□□□□□ -1.66
CX3CL1P78423 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CX3CL1P78423 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.68□□□□□ -1.66
CX3CL1P78423 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms