Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ACTBP60709 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTBP60709 MIR3936-201ENST00000584304 110 ntBASIC4.67□□□□□ -1.66
ACTBP60709 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.67□□□□□ -1.66
ACTBP60709 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 AC096553.1-201ENST00000605169 829 ntBASIC4.67□□□□□ -1.66
ACTBP60709 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTBP60709 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.67□□□□□ -1.66
ACTBP60709 AC114947.2-201ENST00000565748 2125 ntBASIC4.67□□□□□ -1.66
ACTBP60709 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.67□□□□□ -1.66
ACTBP60709 AC025574.1-201ENST00000554784 1653 ntBASIC4.67□□□□□ -1.66
ACTBP60709 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ACTBP60709 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.66□□□□□ -1.66
ACTBP60709 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 TMSB4XP2-201ENST00000335179 210 ntBASIC4.66□□□□□ -1.66
ACTBP60709 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.66□□□□□ -1.66
ACTBP60709 RNA5SP273-201ENST00000362484 113 ntBASIC4.66□□□□□ -1.66
ACTBP60709 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
ACTBP60709 CXADRP1-201ENST00000398098 1095 ntBASIC4.66□□□□□ -1.66
ACTBP60709 OR7E156P-201ENST00000400303 464 ntBASIC4.66□□□□□ -1.66
ACTBP60709 RPSAP35-201ENST00000413753 818 ntBASIC4.66□□□□□ -1.66
ACTBP60709 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.66□□□□□ -1.66
ACTBP60709 AC104333.2-201ENST00000422630 192 ntBASIC4.66□□□□□ -1.66
ACTBP60709 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.66□□□□□ -1.66
ACTBP60709 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.66□□□□□ -1.66
ACTBP60709 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.66□□□□□ -1.66
ACTBP60709 NDUFS5P5-201ENST00000437256 321 ntBASIC4.66□□□□□ -1.66
ACTBP60709 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.66□□□□□ -1.66
ACTBP60709 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.66□□□□□ -1.66
ACTBP60709 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.66□□□□□ -1.66
ACTBP60709 RPS6P2-201ENST00000454208 705 ntBASIC4.66□□□□□ -1.66
ACTBP60709 RN7SKP5-201ENST00000517045 272 ntBASIC4.66□□□□□ -1.66
ACTBP60709 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.66□□□□□ -1.66
ACTBP60709 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ACTBP60709 AL356801.1-201ENST00000559320 294 ntBASIC4.66□□□□□ -1.66
ACTBP60709 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.66□□□□□ -1.66
ACTBP60709 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.66□□□□□ -1.66
ACTBP60709 CXADRP3-202ENST00000617265 1100 ntBASIC4.66□□□□□ -1.66
ACTBP60709 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 AP000542.2-201ENST00000623199 6179 ntBASIC4.66□□□□□ -1.66
ACTBP60709 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.66□□□□□ -1.66
ACTBP60709 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.66□□□□□ -1.66
ACTBP60709 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.66□□□□□ -1.66
ACTBP60709 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
ACTBP60709 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 AL731566.1-201ENST00000620490 1937 ntBASIC4.66□□□□□ -1.66
ACTBP60709 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ACTBP60709 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 AC027279.1-201ENST00000568885 4284 ntBASIC4.66□□□□□ -1.66
ACTBP60709 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ACTBP60709 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.65□□□□□ -1.66
ACTBP60709 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.65□□□□□ -1.66
ACTBP60709 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ACTBP60709 DDX18P3-201ENST00000404856 2007 ntBASIC4.65□□□□□ -1.66
ACTBP60709 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
ACTBP60709 RBPJP2-201ENST00000618187 1444 ntBASIC4.65□□□□□ -1.66
ACTBP60709 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
ACTBP60709 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.65□□□□□ -1.66
ACTBP60709 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
ACTBP60709 AC005332.5-201ENST00000591222 2919 ntBASIC4.65□□□□□ -1.66
ACTBP60709 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
ACTBP60709 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
ACTBP60709 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
ACTBP60709 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ACTBP60709 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ACTBP60709 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.65□□□□□ -1.67
ACTBP60709 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ACTBP60709 RN7SKP275-201ENST00000364626 301 ntBASIC4.65□□□□□ -1.67
ACTBP60709 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.65□□□□□ -1.67
ACTBP60709 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.65□□□□□ -1.67
ACTBP60709 AK4P4-201ENST00000419465 646 ntBASIC4.65□□□□□ -1.67
ACTBP60709 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.65□□□□□ -1.67
ACTBP60709 AC007161.1-204ENST00000423039 460 ntBASIC4.65□□□□□ -1.67
ACTBP60709 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.65□□□□□ -1.67
ACTBP60709 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.65□□□□□ -1.67
ACTBP60709 AC115283.1-201ENST00000427353 400 ntBASIC4.65□□□□□ -1.67
ACTBP60709 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.65□□□□□ -1.67
ACTBP60709 AL450023.1-201ENST00000450868 751 ntBASIC4.65□□□□□ -1.67
ACTBP60709 AL359839.1-201ENST00000451975 1160 ntBASIC4.65□□□□□ -1.67
ACTBP60709 RPL32P33-201ENST00000487023 394 ntBASIC4.65□□□□□ -1.67
ACTBP60709 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
ACTBP60709 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.65□□□□□ -1.67
ACTBP60709 RN7SKP70-201ENST00000516655 271 ntBASIC4.65□□□□□ -1.67
ACTBP60709 AC021678.3-201ENST00000517893 476 ntBASIC4.65□□□□□ -1.67
ACTBP60709 AP006245.2-201ENST00000522004 300 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms