Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC094085.1-201ENST00000468914 584 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 AP000797.2-201ENST00000475768 606 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CR1P49238 RN7SKP70-201ENST00000516655 271 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CR1P49238 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CR1P49238 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.74□□□□□ -1.65
CX3CR1P49238 SNORA35B-201ENST00000607417 129 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AC244107.2-201ENST00000611773 76 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 AL158062.1-201ENST00000619632 745 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 SAMMSON-227ENST00000642114 1199 ntBASIC4.74□□□□□ -1.65
CX3CR1P49238 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CR1P49238 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CR1P49238 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
CX3CR1P49238 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC093849.1-201ENST00000563631 2209 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CX3CR1P49238 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
CX3CR1P49238 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CX3CR1P49238 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CR1P49238 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CX3CR1P49238 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CX3CR1P49238 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 RNU1-146P-201ENST00000364015 165 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CR1P49238 SNORA48.4-201ENST00000391089 134 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AC002524.1-201ENST00000411687 547 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC096644.3-201ENST00000416788 338 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 VN1R3-201ENST00000418822 919 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC106901.1-201ENST00000425086 698 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 RPL7AP49-201ENST00000429522 581 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.73□□□□□ -1.65
CX3CR1P49238 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 RPL12P17-201ENST00000432393 498 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AL591438.1-201ENST00000433508 581 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 RPL19P16-201ENST00000433839 588 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AC090018.1-201ENST00000434369 367 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 RPL12P18-201ENST00000437175 325 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CR1P49238 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC092754.1-201ENST00000472975 479 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CR1P49238 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.73□□□□□ -1.65
CX3CR1P49238 SCARNA16.4-201ENST00000516956 187 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 NRBF2P4-201ENST00000520874 850 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CX3CR1P49238 DUX4L52-201ENST00000549363 777 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC005726.4-201ENST00000582858 458 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.73□□□□□ -1.65
CX3CR1P49238 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CR1P49238 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AL365181.4-201ENST00000609800 547 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC091932.2-201ENST00000623014 291 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 AC103703.1-201ENST00000634783 663 ntBASIC4.73□□□□□ -1.65
CX3CR1P49238 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.73□□□□□ -1.65
CX3CR1P49238 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CX3CR1P49238 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CX3CR1P49238 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CX3CR1P49238 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CR1P49238 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CR1P49238 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AC073136.1-201ENST00000449426 2884 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CX3CR1P49238 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AL353796.1-201ENST00000561542 3241 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 SEPT7P8-201ENST00000413308 775 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 OR6E1P-201ENST00000414424 923 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 Z93019.1-201ENST00000416450 973 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 IPPKP1-201ENST00000422501 768 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms