Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL391422.1-201ENST00000402155 436 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 Z93019.1-201ENST00000416450 973 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 RPL12P17-201ENST00000432393 498 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC019185.1-201ENST00000442718 389 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 RN7SL583P-201ENST00000475692 287 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 RPL7P51-201ENST00000490532 749 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC021106.1-201ENST00000509020 1058 ntBASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAPPC4Q9Y296 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 KARSP1-201ENST00000451871 1752 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC100778.3-201ENST00000580060 1750 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC104964.3-201ENST00000606115 2860 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 MIR143-201ENST00000385300 106 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AP000281.1-201ENST00000444036 316 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 RN7SL346P-201ENST00000491561 294 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 SUMO2P4-201ENST00000504193 276 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC233702.9-201ENST00000581528 203 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC107993.1-201ENST00000591343 684 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC104695.2-201ENST00000605056 775 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AL137246.1-201ENST00000607072 977 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC073869.8-201ENST00000641806 335 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 AC073869.10-201ENST00000642016 354 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 STX3-208ENST00000641815 3236 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 MTCO1P46-201ENST00000451639 1491 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 Z83820.1-201ENST00000456978 1499 ntBASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAPPC4Q9Y296 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AL022393.1-201ENST00000625142 1677 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RNA5SP319-201ENST00000362768 119 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RN7SKP124-201ENST00000364730 341 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 MIR1271-201ENST00000408537 86 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms