Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 RNA5SP507-201ENST00000363603 121 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC099670.2-201ENST00000435130 321 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AURKAPS1-201ENST00000451805 1212 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 RN7SL329P-201ENST00000467740 299 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 RPS21P4-201ENST00000487122 248 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 DUTP1-201ENST00000493631 470 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC072052.1-201ENST00000496556 306 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC231760.1-201ENST00000498002 260 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC111000.6-201ENST00000514471 709 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC138832.1-201ENST00000522871 556 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC025423.2-201ENST00000537570 439 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AC067838.1-201ENST00000606064 577 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 AL133481.2-203ENST00000607558 139 ntBASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF3Q9HD45 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 RPL11P3-201ENST00000395256 523 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AL645927.1-201ENST00000396783 406 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 RN7SKP273-201ENST00000411392 314 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 RPL23AP27-201ENST00000415161 451 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 VN1R31P-201ENST00000417498 730 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 GNG5P5-201ENST00000420444 220 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 NPM1P18-201ENST00000434232 732 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 RPS26P41-201ENST00000450370 284 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 RPL12P39-201ENST00000455456 496 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 OR9N1P-201ENST00000491296 333 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 RPL15P21-201ENST00000495592 567 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 GLUD1P3-202ENST00000508551 200 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 OR4A43P-201ENST00000532938 908 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 HMGN2P6-201ENST00000551091 273 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AL121839.1-201ENST00000556233 1185 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AC122134.1-201ENST00000565664 1104 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 MIR4675-201ENST00000577898 77 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 MIR4700-201ENST00000578311 74 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AC000068.2-201ENST00000608816 460 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AC005618.4-201ENST00000625053 554 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AC027228.2-201ENST00000567141 2154 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 AC093775.1-201ENST00000624154 1868 ntBASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.56□□□□□ -1.52
TM9SF3Q9HD45 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 MFSD8-239ENST00000641590 2479 ntBASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TM9SF3Q9HD45 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms