Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPL32P33-201ENST00000487023 394 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 AC022133.1-201ENST00000490961 571 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 RPEP1-201ENST00000504507 658 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL1P09341 SCARNA6.1-201ENST00000516989 238 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 AP000859.1-201ENST00000525536 307 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.05□□□□□ -1.76
CXCL1P09341 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 RN7SL66P-201ENST00000582099 264 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.05□□□□□ -1.76
CXCL1P09341 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC063977.5-201ENST00000601044 974 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 AC108673.3-201ENST00000609183 335 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 MIR6883-201ENST00000614952 78 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 SNX18P1Y-201ENST00000616231 511 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL1P09341 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC011503.2-201ENST00000594230 1500 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.04□□□□□ -1.76
CXCL1P09341 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CXCL1P09341 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 RN7SKP153-201ENST00000365026 316 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 SNORD96B-201ENST00000386148 79 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 RBBP4P5-201ENST00000398583 1266 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL1P09341 RANP7-201ENST00000418085 644 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 FABP7P1-201ENST00000424004 391 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AKR1B10P1-201ENST00000425765 942 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 LINC00328-2P-201ENST00000436585 219 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 RPL7AP61-201ENST00000443410 636 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CXCL1P09341 AL589765.3-201ENST00000446084 462 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 AC005008.1-201ENST00000456151 612 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AC009963.3-201ENST00000458090 486 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 AC098847.1-201ENST00000473094 348 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AC022215.1-201ENST00000481770 362 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 RPL7P41-201ENST00000485823 957 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.04□□□□□ -1.76
CXCL1P09341 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 AC018639.1-201ENST00000492994 442 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL1P09341 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 RNA5SP441-201ENST00000516809 88 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.04□□□□□ -1.76
CXCL1P09341 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL1P09341 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 HSPE1P2-201ENST00000554777 306 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL1P09341 AC018695.5-201ENST00000605872 315 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AL512413.1-201ENST00000606489 382 ntBASIC4.04□□□□□ -1.76
CXCL1P09341 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL1P09341 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.04□□□□□ -1.76
CXCL1P09341 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL1P09341 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.04□□□□□ -1.76
CXCL1P09341 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL1P09341 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL1P09341 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CXCL1P09341 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.04□□□□□ -1.76
CXCL1P09341 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL1P09341 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.03□□□□□ -1.76
CXCL1P09341 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms