Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 MIR4443-201ENST00000585052 53 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AC079610.2-201ENST00000604818 690 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 MIR6768-201ENST00000610734 72 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AL512624.1-201ENST00000613638 469 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 U1.34-201ENST00000618578 162 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 ZNF658B-201ENST00000602828 3408 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AC011416.1-201ENST00000514947 1732 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 RNA5SP477-201ENST00000362639 119 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 RNU5B-1-201ENST00000363286 116 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 GAPDHP15-201ENST00000398586 975 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AL121977.1-201ENST00000401636 979 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC092648.1-201ENST00000425870 423 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AL035458.1-201ENST00000433096 585 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 Z73417.1-201ENST00000447373 778 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC092155.2-201ENST00000454675 477 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 RNA5SP271-201ENST00000516700 88 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC008429.4-201ENST00000521201 182 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 OR7E128P-201ENST00000532736 1024 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 SNORD39.2-201ENST00000579995 76 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 Z99289.3-201ENST00000605586 594 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC141002.1-201ENST00000607025 279 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC127024.6-201ENST00000621598 424 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC009039.2-201ENST00000624524 529 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 NCOA4P2-201ENST00000340589 1813 ntBASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDHB1Q9Y5F3 MTCO1P15-201ENST00000529569 1526 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 MFSD8-220ENST00000641243 1422 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 CIR1P2-201ENST00000514821 1342 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 RNU4-31P-201ENST00000384211 141 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms