Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGA1P17096 AL355834.1-201ENST00000556602 3965 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 RNU1-74P-201ENST00000384108 171 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 MIR589-201ENST00000385238 99 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HMGA1P17096 RN7SKP114-201ENST00000410327 279 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGA1P17096 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGA1P17096 AC138761.5-201ENST00000433967 325 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGA1P17096 RPL34P20-201ENST00000442771 351 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGA1P17096 TRY2P-201ENST00000448860 689 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 TAAR4P-201ENST00000454843 1039 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 AC091685.2-201ENST00000454924 864 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGA1P17096 AC108161.1-201ENST00000461060 402 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 RPS24P16-201ENST00000497294 392 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGA1P17096 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGA1P17096 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGA1P17096 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGA1P17096 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGA1P17096 AP005432.2-201ENST00000608162 586 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 AL356608.1-201ENST00000610034 820 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
HMGA1P17096 AP001784.1-201ENST00000624107 428 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 AC005831.1-201ENST00000624384 1697 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGA1P17096 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 BCORP1-203ENST00000513194 5093 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGA1P17096 AL360270.2-201ENST00000562952 5985 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGA1P17096 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGA1P17096 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGA1P17096 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGA1P17096 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGA1P17096 OR9G4-201ENST00000302957 984 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 RNA5SP455-201ENST00000365190 119 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HMGA1P17096 AC068138.1-201ENST00000412635 217 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGA1P17096 AL161722.2-201ENST00000434731 981 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 NDUFA5P8-201ENST00000449019 346 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGA1P17096 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.41□□□□□ -1.54
HMGA1P17096 RPS23P1-201ENST00000491662 432 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGA1P17096 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGA1P17096 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.41□□□□□ -1.54
HMGA1P17096 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.41□□□□□ -1.54
HMGA1P17096 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGA1P17096 AC130364.2-201ENST00000528639 604 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGA1P17096 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGA1P17096 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGA1P17096 MIR7853-201ENST00000584820 132 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 AC010632.3-201ENST00000611377 369 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 EIF3FP1-201ENST00000613970 806 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 AC091905.4-201ENST00000623432 202 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 AC112694.2-201ENST00000623697 768 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 AC010480.1-201ENST00000624823 684 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 AL353662.3-201ENST00000625131 237 ntBASIC5.41□□□□□ -1.54
HMGA1P17096 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGA1P17096 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGA1P17096 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGA1P17096 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGA1P17096 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGA1P17096 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGA1P17096 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGA1P17096 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGA1P17096 DNM1P47-203ENST00000571780 12667 ntBASIC5.4□□□□□ -1.54
HMGA1P17096 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGA1P17096 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGA1P17096 MIPEPP2-201ENST00000422560 1819 ntBASIC5.4□□□□□ -1.54
HMGA1P17096 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGA1P17096 RN7SKP153-201ENST00000365026 316 ntBASIC5.4□□□□□ -1.54
HMGA1P17096 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HMGA1P17096 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGA1P17096 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGA1P17096 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms