Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.06□□□□□ -1.44
MMP3P08254 AP002371.2-201ENST00000624450 503 ntBASIC6.06□□□□□ -1.44
MMP3P08254 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.06□□□□□ -1.44
MMP3P08254 LINC01739-205ENST00000641890 573 ntBASIC6.06□□□□□ -1.44
MMP3P08254 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.06□□□□□ -1.44
MMP3P08254 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 AP000547.3-204ENST00000588548 2523 ntBASIC6.06□□□□□ -1.44
MMP3P08254 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 OR4F13P-202ENST00000560066 2054 ntBASIC6.06□□□□□ -1.44
MMP3P08254 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
MMP3P08254 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 NCOA4P2-201ENST00000340589 1813 ntBASIC6.06□□□□□ -1.44
MMP3P08254 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.06□□□□□ -1.44
MMP3P08254 AC068769.1-201ENST00000474767 2426 ntBASIC6.06□□□□□ -1.44
MMP3P08254 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MMP3P08254 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.05□□□□□ -1.44
MMP3P08254 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
MMP3P08254 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
MMP3P08254 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
MMP3P08254 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.05□□□□□ -1.44
MMP3P08254 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
MMP3P08254 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MMP3P08254 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.05□□□□□ -1.44
MMP3P08254 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MMP3P08254 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.05□□□□□ -1.44
MMP3P08254 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.05□□□□□ -1.44
MMP3P08254 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.05□□□□□ -1.44
MMP3P08254 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MMP3P08254 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MMP3P08254 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
MMP3P08254 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.05□□□□□ -1.44
MMP3P08254 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.05□□□□□ -1.44
MMP3P08254 RPS11P7-201ENST00000442125 465 ntBASIC6.05□□□□□ -1.44
MMP3P08254 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.05□□□□□ -1.44
MMP3P08254 RPL35AP28-201ENST00000459730 331 ntBASIC6.05□□□□□ -1.44
MMP3P08254 AC025181.1-201ENST00000477507 416 ntBASIC6.05□□□□□ -1.44
MMP3P08254 RN7SL97P-201ENST00000486780 299 ntBASIC6.05□□□□□ -1.44
MMP3P08254 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.05□□□□□ -1.44
MMP3P08254 RPS17P5-201ENST00000498293 408 ntBASIC6.05□□□□□ -1.44
MMP3P08254 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
MMP3P08254 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.05□□□□□ -1.44
MMP3P08254 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.05□□□□□ -1.44
MMP3P08254 AC108043.1-201ENST00000512696 574 ntBASIC6.05□□□□□ -1.44
MMP3P08254 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.05□□□□□ -1.44
MMP3P08254 AC122688.1-201ENST00000541494 223 ntBASIC6.05□□□□□ -1.44
MMP3P08254 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.05□□□□□ -1.44
MMP3P08254 AC011270.1-201ENST00000558606 583 ntBASIC6.05□□□□□ -1.44
MMP3P08254 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.05□□□□□ -1.44
MMP3P08254 AC018558.5-201ENST00000565840 952 ntBASIC6.05□□□□□ -1.44
MMP3P08254 AC005341.1-201ENST00000571086 708 ntBASIC6.05□□□□□ -1.44
MMP3P08254 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.05□□□□□ -1.44
MMP3P08254 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.05□□□□□ -1.44
MMP3P08254 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.05□□□□□ -1.44
MMP3P08254 AC144521.1-201ENST00000607148 956 ntBASIC6.05□□□□□ -1.44
MMP3P08254 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
MMP3P08254 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MMP3P08254 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
MMP3P08254 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MMP3P08254 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.04□□□□□ -1.44
MMP3P08254 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MMP3P08254 AC131971.1-201ENST00000332881 1482 ntBASIC6.04□□□□□ -1.44
MMP3P08254 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP3P08254 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP3P08254 SNX18P3-202ENST00000565670 1750 ntBASIC6.04□□□□□ -1.44
MMP3P08254 AC023421.1-201ENST00000590535 1785 ntBASIC6.04□□□□□ -1.44
MMP3P08254 HSPA8P18-201ENST00000439846 1928 ntBASIC6.04□□□□□ -1.44
MMP3P08254 AC103591.2-201ENST00000265259 766 ntBASIC6.04□□□□□ -1.44
MMP3P08254 RNU6-386P-201ENST00000362650 107 ntBASIC6.04□□□□□ -1.44
MMP3P08254 OR6K3-202ENST00000368146 996 ntBASIC6.04□□□□□ -1.44
MMP3P08254 GNG5P2-201ENST00000372054 207 ntBASIC6.04□□□□□ -1.44
MMP3P08254 AL109941.1-201ENST00000401925 229 ntBASIC6.04□□□□□ -1.44
MMP3P08254 RPL12P17-201ENST00000432393 498 ntBASIC6.04□□□□□ -1.44
MMP3P08254 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP3P08254 VN1R54P-201ENST00000435210 1049 ntBASIC6.04□□□□□ -1.44
MMP3P08254 MTND4P15-201ENST00000437913 1033 ntBASIC6.04□□□□□ -1.44
MMP3P08254 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.04□□□□□ -1.44
MMP3P08254 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP3P08254 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP3P08254 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
MMP3P08254 AC110775.1-201ENST00000513721 462 ntBASIC6.04□□□□□ -1.44
MMP3P08254 AC019227.1-201ENST00000526902 510 ntBASIC6.04□□□□□ -1.44
MMP3P08254 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.04□□□□□ -1.44
MMP3P08254 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.04□□□□□ -1.44
MMP3P08254 MIR4646-201ENST00000580775 63 ntBASIC6.04□□□□□ -1.44
MMP3P08254 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.04□□□□□ -1.44
MMP3P08254 AC026790.2-201ENST00000606282 430 ntBASIC6.04□□□□□ -1.44
MMP3P08254 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP3P08254 AP002799.1-201ENST00000623552 423 ntBASIC6.04□□□□□ -1.44
MMP3P08254 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP3P08254 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP3P08254 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP3P08254 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP3P08254 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
MMP3P08254 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP3P08254 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP3P08254 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
MMP3P08254 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP3P08254 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms