Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RPL12P17-201ENST00000432393 498 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 OR6D1P-201ENST00000436165 939 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 ARAFP2-201ENST00000440565 559 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 RAD1P2-201ENST00000446414 663 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC090804.1-201ENST00000448870 490 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 OR52E3P-201ENST00000452083 936 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 VDAC2P4-201ENST00000452925 711 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 RPL31P53-201ENST00000457065 348 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC022336.1-201ENST00000475510 337 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 RN7SL649P-201ENST00000496974 275 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 RPS24P16-201ENST00000497294 392 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC28A1O00337 SNORA43.3-201ENST00000517240 103 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC092709.1-201ENST00000521355 1045 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AC079600.1-201ENST00000550326 297 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 OR11H3P-201ENST00000554547 982 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC28A1O00337 MRPS21P7-201ENST00000566937 238 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC009852.2-201ENST00000567898 485 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AC067773.1-201ENST00000603284 1094 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 PPATP2-201ENST00000605635 508 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC009779.8-202ENST00000607990 932 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AL158062.1-201ENST00000619632 745 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC135068.5-201ENST00000624197 983 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC28A1O00337 AC008691.1-209ENST00000642094 814 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
SLC28A1O00337 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 AC003973.3-201ENST00000624863 2822 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SLC28A1O00337 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC28A1O00337 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC28A1O00337 HSPA8P14-201ENST00000552265 1805 ntBASIC5.25□□□□□ -1.57
SLC28A1O00337 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC28A1O00337 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC28A1O00337 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC114786.1-201ENST00000512892 1415 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SLC28A1O00337 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 AL603750.1-201ENST00000624216 1717 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 OR52B3P-201ENST00000314715 928 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SLC28A1O00337 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 RNU1-19P-201ENST00000363306 165 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC28A1O00337 HMGN2P27-201ENST00000427352 270 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 RPS10P18-201ENST00000442662 495 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AL450023.1-201ENST00000450868 751 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AL445665.1-202ENST00000452436 324 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SLC28A1O00337 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AL049874.2-201ENST00000492636 288 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC28A1O00337 OR8G3P-201ENST00000533406 921 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC28A1O00337 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC28A1O00337 DUX4L52-201ENST00000549363 777 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC020915.5-201ENST00000596836 964 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AL365181.4-201ENST00000609800 547 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AC244107.2-201ENST00000611773 76 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AC109583.2-201ENST00000617367 129 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SLC28A1O00337 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC129915.3-201ENST00000634128 948 ntBASIC5.24□□□□□ -1.57
SLC28A1O00337 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC28A1O00337 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC28A1O00337 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SLC28A1O00337 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC28A1O00337 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms