Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 NPM1P28-201ENST00000492269 840 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 ENPP7P11-201ENST00000505915 627 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC006349.1-201ENST00000555526 235 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 RPL10P14-201ENST00000565265 298 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC008521.2-201ENST00000591021 259 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC008814.1-201ENST00000603797 406 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC010245.2-201ENST00000606908 1167 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AC023632.6-201ENST00000624338 2177 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RNU1-146P-201ENST00000364015 165 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RN7SKP124-201ENST00000364730 341 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 U3.23-201ENST00000391132 200 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 NPM1P38-201ENST00000403835 865 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RN7SKP16-201ENST00000410180 299 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RN7SKP286-201ENST00000410894 299 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 NAP1L4P2-201ENST00000425958 899 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AP000281.1-201ENST00000444036 316 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AL161636.2-201ENST00000445179 927 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RPL31P15-201ENST00000449770 338 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RPL12P24-201ENST00000474907 486 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RPL7P40-201ENST00000481703 745 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RPEP1-201ENST00000504507 658 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AC006427.1-201ENST00000514359 712 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 RNA5SP373-201ENST00000517271 95 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AC023389.2-201ENST00000580031 955 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AC104695.2-201ENST00000605056 775 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 FAM72A-208ENST00000607379 1139 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 MIR8080-201ENST00000622224 89 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AL691477.1-201ENST00000624398 162 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 AL078595.2-201ENST00000605309 1780 ntBASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAV27A0A087WT01 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
TRAV27A0A087WT01 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TRAV27A0A087WT01 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
TRAV27A0A087WT01 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
TRAV27A0A087WT01 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 MARK2P12-201ENST00000420129 585 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 CYCSP6-201ENST00000434498 302 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AL161722.2-201ENST00000434731 981 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 BX842559.2-201ENST00000451418 605 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 EIF1P7-201ENST00000487533 337 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 COX6B1P2-201ENST00000489624 230 ntBASIC4.71□□□□□ -1.66
TRAV27A0A087WT01 EIF3LP3-201ENST00000495197 822 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 248.3 ms