Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SIPA1Q96FS4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SIPA1Q96FS4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIPA1Q96FS4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.71□□□□□ -1.5
SIPA1Q96FS4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIPA1Q96FS4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SIPA1Q96FS4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SIPA1Q96FS4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC003973.3-201ENST00000624863 2822 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 SPTLC1P2-201ENST00000407089 121 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 RPS6P23-201ENST00000413224 722 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC021876.1-201ENST00000425959 359 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 YY1P1-201ENST00000427625 668 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 MTCO1P45-201ENST00000431457 267 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 BX679664.2-201ENST00000439282 283 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 OSTCP1-201ENST00000455507 450 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AL445687.2-201ENST00000458156 728 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 UBA52P7-201ENST00000486088 380 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 OR10G5P-201ENST00000532733 358 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC244502.2-201ENST00000543361 851 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC007620.3-201ENST00000608131 497 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC020658.4-201ENST00000613987 684 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC016769.4-201ENST00000616893 535 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 AC025470.1-201ENST00000510053 2032 ntBASIC5.7□□□□□ -1.5
SIPA1Q96FS4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.7□□□□□ -1.5
SIPA1Q96FS4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 RNA5SP234-201ENST00000363916 119 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC083799.1-201ENST00000366451 910 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 MIR130A-201ENST00000385274 89 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 MT-RNR1-201ENST00000389680 954 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 U3.23-201ENST00000391132 200 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 SNORA79B-201ENST00000410557 148 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 FTLP19-201ENST00000433300 394 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC006335.2-201ENST00000437993 330 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC019185.1-201ENST00000442718 389 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 SEPT7P3-201ENST00000455017 621 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AL355032.1-201ENST00000472981 438 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 OR5M14P-201ENST00000506803 618 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AL121594.2-201ENST00000541658 472 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 HSPE1P2-201ENST00000554777 306 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC125494.2-201ENST00000602431 657 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AC100814.1-201ENST00000606963 623 ntBASIC5.69□□□□□ -1.5
SIPA1Q96FS4 AL512329.2-201ENST00000607350 548 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms