Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC4Q92889 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC4Q92889 Z73417.1-201ENST00000447373 778 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.74□□□□□ -1.33
ERCC4Q92889 RPL23AP40-201ENST00000487630 390 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC138409.2-202ENST00000507274 458 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC4Q92889 RNU6-311P-201ENST00000516224 102 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC091163.3-201ENST00000518269 1144 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AP001000.1-201ENST00000526843 742 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC4Q92889 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC4Q92889 OR4U1P-201ENST00000554958 912 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AP000919.1-202ENST00000581139 1264 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AP005136.2-201ENST00000583253 1049 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AC119403.2-201ENST00000590960 598 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AC010487.1-201ENST00000594408 1172 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AC008536.1-201ENST00000602872 669 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 WBP1LP12-201ENST00000604449 331 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AC002487.1-201ENST00000604565 994 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 NDUFB9P1-201ENST00000604683 510 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 MIR6811-201ENST00000620409 58 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC4Q92889 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AL355488.2-201ENST00000609909 2850 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
ERCC4Q92889 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
ERCC4Q92889 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC4Q92889 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC4Q92889 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
ERCC4Q92889 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC4Q92889 RNU6-207P-201ENST00000384137 107 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC4Q92889 BX119321.1-201ENST00000428912 797 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC4Q92889 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC4Q92889 ARF4P4-201ENST00000439608 520 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AL358794.1-201ENST00000445689 381 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC4Q92889 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 H3F3AP5-201ENST00000475267 429 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 AC093719.1-201ENST00000480427 441 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 RPL12P30-201ENST00000488389 499 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 RPS26P24-201ENST00000497656 331 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.73□□□□□ -1.33
ERCC4Q92889 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 RNU6-276P-201ENST00000516114 96 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AP003033.2-201ENST00000528901 805 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC011500.1-201ENST00000601963 469 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 GAS5-AS1-201ENST00000602767 694 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC011330.2-201ENST00000621680 635 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC4Q92889 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
ERCC4Q92889 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC4Q92889 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
ERCC4Q92889 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC4Q92889 BCORP1-203ENST00000513194 5093 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 AC130304.1-201ENST00000622942 2385 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC4Q92889 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC4Q92889 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC4Q92889 AC006484.1-201ENST00000435086 1884 ntBASIC6.73□□□□□ -1.33
ERCC4Q92889 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 RNU5B-4P-201ENST00000363508 111 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC4Q92889 TAF9BP2-201ENST00000400856 499 ntBASIC6.72□□□□□ -1.33
ERCC4Q92889 PRELID1P1-201ENST00000403549 660 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms