Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.84□□□□□ -1.64
FOXF1Q12946 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
FOXF1Q12946 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
FOXF1Q12946 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
FOXF1Q12946 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
FOXF1Q12946 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.84□□□□□ -1.64
FOXF1Q12946 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
FOXF1Q12946 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXF1Q12946 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXF1Q12946 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
FOXF1Q12946 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXF1Q12946 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXF1Q12946 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC090018.1-201ENST00000434369 367 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXF1Q12946 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
FOXF1Q12946 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXF1Q12946 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXF1Q12946 NMNAT1P5-201ENST00000559657 841 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 AC007225.2-201ENST00000562529 256 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXF1Q12946 LSM1P2-201ENST00000604911 322 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC022467.1-201ENST00000614738 749 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 AP003400.3-201ENST00000624904 346 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXF1Q12946 CASC19-264ENST00000641912 1184 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
FOXF1Q12946 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
FOXF1Q12946 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
FOXF1Q12946 AC079298.1-201ENST00000625026 1619 ntBASIC4.83□□□□□ -1.64
FOXF1Q12946 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
FOXF1Q12946 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
FOXF1Q12946 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXF1Q12946 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXF1Q12946 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXF1Q12946 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXF1Q12946 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXF1Q12946 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
FOXF1Q12946 SNORA51.1-201ENST00000363243 140 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 DPPA2P2-201ENST00000418220 897 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 AC017019.1-201ENST00000426129 261 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 RPS4XP1-201ENST00000482189 787 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXF1Q12946 RPSAP51-201ENST00000497462 645 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 MORF4L2P1-201ENST00000503761 858 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXF1Q12946 AC138832.1-201ENST00000522871 556 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXF1Q12946 AC005252.1-201ENST00000604518 1063 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXF1Q12946 MIR6837-201ENST00000620884 64 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXF1Q12946 AC074101.1-201ENST00000637861 241 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
FOXF1Q12946 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXF1Q12946 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
FOXF1Q12946 OR55B1P-203ENST00000641518 2602 ntBASIC4.82□□□□□ -1.64
FOXF1Q12946 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXF1Q12946 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXF1Q12946 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXF1Q12946 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXF1Q12946 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXF1Q12946 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXF1Q12946 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXF1Q12946 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXF1Q12946 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXF1Q12946 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXF1Q12946 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
FOXF1Q12946 MAPK10-328ENST00000641553 4009 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXF1Q12946 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
FOXF1Q12946 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXF1Q12946 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXF1Q12946 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXF1Q12946 OR9G4-201ENST00000302957 984 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXF1Q12946 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXF1Q12946 RNA5SP183-201ENST00000362452 119 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 RNU1-19P-201ENST00000363306 165 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 RNA5SP187-201ENST00000384400 119 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 SNORA67-201ENST00000384423 137 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 GPS2P1-201ENST00000411761 986 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.81□□□□□ -1.64
FOXF1Q12946 AC124944.2-201ENST00000429866 1242 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXF1Q12946 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXF1Q12946 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXF1Q12946 NPM1P19-201ENST00000450070 712 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 GAPDHP14-201ENST00000450472 937 ntBASIC4.81□□□□□ -1.64
FOXF1Q12946 AC079168.1-201ENST00000458741 345 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms