Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 AC235565.1-201ENST00000456962 1325 ntBASIC5.76□□□□□ -1.49
LHX1P48742 PABPC1P6-201ENST00000445594 1829 ntBASIC5.76□□□□□ -1.49
LHX1P48742 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.76□□□□□ -1.49
LHX1P48742 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 AL355488.2-201ENST00000609909 2850 ntBASIC5.76□□□□□ -1.49
LHX1P48742 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
LHX1P48742 SNORA67-201ENST00000384423 137 ntBASIC5.76□□□□□ -1.49
LHX1P48742 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LHX1P48742 MIR1178-201ENST00000408396 91 ntBASIC5.76□□□□□ -1.49
LHX1P48742 RPL35AP24-201ENST00000413846 330 ntBASIC5.76□□□□□ -1.49
LHX1P48742 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.76□□□□□ -1.49
LHX1P48742 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.76□□□□□ -1.49
LHX1P48742 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.76□□□□□ -1.49
LHX1P48742 HMGN1P8-201ENST00000463578 288 ntBASIC5.76□□□□□ -1.49
LHX1P48742 AC092754.1-201ENST00000472975 479 ntBASIC5.76□□□□□ -1.49
LHX1P48742 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.76□□□□□ -1.49
LHX1P48742 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.76□□□□□ -1.49
LHX1P48742 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.76□□□□□ -1.49
LHX1P48742 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.76□□□□□ -1.49
LHX1P48742 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.76□□□□□ -1.49
LHX1P48742 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LHX1P48742 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.76□□□□□ -1.49
LHX1P48742 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.76□□□□□ -1.49
LHX1P48742 RBM22P1-201ENST00000578589 1214 ntBASIC5.76□□□□□ -1.49
LHX1P48742 OOSP1P2-201ENST00000579644 351 ntBASIC5.76□□□□□ -1.49
LHX1P48742 MIR4420-201ENST00000583944 77 ntBASIC5.76□□□□□ -1.49
LHX1P48742 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.76□□□□□ -1.49
LHX1P48742 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 AC009237.13-201ENST00000603193 276 ntBASIC5.76□□□□□ -1.49
LHX1P48742 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.76□□□□□ -1.49
LHX1P48742 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.76□□□□□ -1.49
LHX1P48742 AC000095.2-202ENST00000637415 154 ntBASIC5.76□□□□□ -1.49
LHX1P48742 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LHX1P48742 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.76□□□□□ -1.49
LHX1P48742 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.76□□□□□ -1.49
LHX1P48742 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LHX1P48742 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LHX1P48742 AC007938.2-201ENST00000604666 2634 ntBASIC5.76□□□□□ -1.49
LHX1P48742 AC090220.1-201ENST00000593078 1699 ntBASIC5.75□□□□□ -1.49
LHX1P48742 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.75□□□□□ -1.49
LHX1P48742 AL359715.3-201ENST00000569267 2123 ntBASIC5.75□□□□□ -1.49
LHX1P48742 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LHX1P48742 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
LHX1P48742 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LHX1P48742 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LHX1P48742 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LHX1P48742 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.75□□□□□ -1.49
LHX1P48742 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LHX1P48742 OR9K1P-201ENST00000326513 941 ntBASIC5.75□□□□□ -1.49
LHX1P48742 MIR223-201ENST00000385204 110 ntBASIC5.75□□□□□ -1.49
LHX1P48742 U3.28-201ENST00000391249 210 ntBASIC5.75□□□□□ -1.49
LHX1P48742 AC093655.2-201ENST00000425735 631 ntBASIC5.75□□□□□ -1.49
LHX1P48742 RN7SL172P-201ENST00000460535 303 ntBASIC5.75□□□□□ -1.49
LHX1P48742 SEPT7P6-201ENST00000469999 1143 ntBASIC5.75□□□□□ -1.49
LHX1P48742 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.75□□□□□ -1.49
LHX1P48742 RPS4XP1-201ENST00000482189 787 ntBASIC5.75□□□□□ -1.49
LHX1P48742 UBA52P7-201ENST00000486088 380 ntBASIC5.75□□□□□ -1.49
LHX1P48742 AC098799.1-201ENST00000504752 800 ntBASIC5.75□□□□□ -1.49
LHX1P48742 AC091912.1-201ENST00000511351 248 ntBASIC5.75□□□□□ -1.49
LHX1P48742 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.75□□□□□ -1.49
LHX1P48742 AC111000.6-201ENST00000514471 709 ntBASIC5.75□□□□□ -1.49
LHX1P48742 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.75□□□□□ -1.49
LHX1P48742 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.75□□□□□ -1.49
LHX1P48742 AP004607.2-201ENST00000533949 322 ntBASIC5.75□□□□□ -1.49
LHX1P48742 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.75□□□□□ -1.49
LHX1P48742 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
LHX1P48742 RN7SL356P-201ENST00000582228 248 ntBASIC5.75□□□□□ -1.49
LHX1P48742 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
LHX1P48742 AF117829.2-201ENST00000619538 361 ntBASIC5.75□□□□□ -1.49
LHX1P48742 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LHX1P48742 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.75□□□□□ -1.49
LHX1P48742 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.75□□□□□ -1.49
LHX1P48742 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LHX1P48742 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LHX1P48742 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LHX1P48742 AC006206.1-201ENST00000544842 3387 ntBASIC5.75□□□□□ -1.49
LHX1P48742 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LHX1P48742 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LHX1P48742 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 AC138907.8-201ENST00000623981 2256 ntBASIC5.74□□□□□ -1.49
LHX1P48742 AL590763.1-201ENST00000398297 1545 ntBASIC5.74□□□□□ -1.49
LHX1P48742 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LHX1P48742 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LHX1P48742 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LHX1P48742 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LHX1P48742 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LHX1P48742 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
LHX1P48742 U3.7-201ENST00000363668 216 ntBASIC5.74□□□□□ -1.49
LHX1P48742 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
LHX1P48742 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
LHX1P48742 DBIP1-201ENST00000401435 260 ntBASIC5.74□□□□□ -1.49
LHX1P48742 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LHX1P48742 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms