Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SLC35E1P1-201ENST00000419313 864 ntBASIC6.35□□□□□ -1.39
TOP1P11387 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.35□□□□□ -1.39
TOP1P11387 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.35□□□□□ -1.39
TOP1P11387 RPSAP51-201ENST00000497462 645 ntBASIC6.35□□□□□ -1.39
TOP1P11387 AC021106.1-201ENST00000509020 1058 ntBASIC6.35□□□□□ -1.39
TOP1P11387 AC109464.1-201ENST00000511091 819 ntBASIC6.35□□□□□ -1.39
TOP1P11387 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP1P11387 RNA5SP34-201ENST00000516887 130 ntBASIC6.35□□□□□ -1.39
TOP1P11387 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.35□□□□□ -1.39
TOP1P11387 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.35□□□□□ -1.39
TOP1P11387 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.35□□□□□ -1.39
TOP1P11387 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.35□□□□□ -1.39
TOP1P11387 AC109583.2-201ENST00000617367 129 ntBASIC6.35□□□□□ -1.39
TOP1P11387 AC021766.1-201ENST00000624404 741 ntBASIC6.35□□□□□ -1.39
TOP1P11387 AC073869.8-201ENST00000641806 335 ntBASIC6.35□□□□□ -1.39
TOP1P11387 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TOP1P11387 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TOP1P11387 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TOP1P11387 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOP1P11387 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOP1P11387 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.34□□□□□ -1.39
TOP1P11387 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TOP1P11387 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
TOP1P11387 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOP1P11387 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
TOP1P11387 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TOP1P11387 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOP1P11387 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.34□□□□□ -1.39
TOP1P11387 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TOP1P11387 AL136455.1-201ENST00000441083 1240 ntBASIC6.34□□□□□ -1.39
TOP1P11387 AL161722.1-201ENST00000446972 1032 ntBASIC6.34□□□□□ -1.39
TOP1P11387 AL035090.1-201ENST00000454835 332 ntBASIC6.34□□□□□ -1.39
TOP1P11387 AC110749.1-201ENST00000462007 357 ntBASIC6.34□□□□□ -1.39
TOP1P11387 ABCC13-202ENST00000463099 3842 ntBASIC6.34□□□□□ -1.39
TOP1P11387 PSAT1P4-201ENST00000466500 526 ntBASIC6.34□□□□□ -1.39
TOP1P11387 AC090602.1-201ENST00000469695 252 ntBASIC6.34□□□□□ -1.39
TOP1P11387 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.34□□□□□ -1.39
TOP1P11387 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TOP1P11387 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.34□□□□□ -1.39
TOP1P11387 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.34□□□□□ -1.39
TOP1P11387 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.34□□□□□ -1.39
TOP1P11387 AP004607.2-201ENST00000533949 322 ntBASIC6.34□□□□□ -1.39
TOP1P11387 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TOP1P11387 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.34□□□□□ -1.39
TOP1P11387 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOP1P11387 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOP1P11387 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOP1P11387 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOP1P11387 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TOP1P11387 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TOP1P11387 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
TOP1P11387 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.33□□□□□ -1.4
TOP1P11387 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOP1P11387 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.33□□□□□ -1.4
TOP1P11387 AC005294.1-201ENST00000355509 281 ntBASIC6.33□□□□□ -1.4
TOP1P11387 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TOP1P11387 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
TOP1P11387 AL050305.1-201ENST00000399993 1230 ntBASIC6.33□□□□□ -1.4
TOP1P11387 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.33□□□□□ -1.4
TOP1P11387 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.33□□□□□ -1.4
TOP1P11387 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.33□□□□□ -1.4
TOP1P11387 FAM96AP1-201ENST00000430879 482 ntBASIC6.33□□□□□ -1.4
TOP1P11387 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.33□□□□□ -1.4
TOP1P11387 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.33□□□□□ -1.4
TOP1P11387 GAPDHP25-201ENST00000447061 1001 ntBASIC6.33□□□□□ -1.4
TOP1P11387 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.33□□□□□ -1.4
TOP1P11387 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.33□□□□□ -1.4
TOP1P11387 RPS21P4-201ENST00000487122 248 ntBASIC6.33□□□□□ -1.4
TOP1P11387 RN7SL30P-201ENST00000488416 306 ntBASIC6.33□□□□□ -1.4
TOP1P11387 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.33□□□□□ -1.4
TOP1P11387 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TOP1P11387 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.33□□□□□ -1.4
TOP1P11387 AC005341.1-201ENST00000571086 708 ntBASIC6.33□□□□□ -1.4
TOP1P11387 AC027216.1-201ENST00000577726 685 ntBASIC6.33□□□□□ -1.4
TOP1P11387 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
TOP1P11387 AP000769.2-201ENST00000602344 396 ntBASIC6.33□□□□□ -1.4
TOP1P11387 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.33□□□□□ -1.4
TOP1P11387 AL022394.1-201ENST00000606979 292 ntBASIC6.33□□□□□ -1.4
TOP1P11387 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.33□□□□□ -1.4
TOP1P11387 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.33□□□□□ -1.4
TOP1P11387 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TOP1P11387 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TOP1P11387 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOP1P11387 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
TOP1P11387 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOP1P11387 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOP1P11387 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TOP1P11387 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.32□□□□□ -1.4
TOP1P11387 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TOP1P11387 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TOP1P11387 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TOP1P11387 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
TOP1P11387 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TOP1P11387 AL590763.1-201ENST00000398297 1545 ntBASIC6.32□□□□□ -1.4
TOP1P11387 SNORD56.6-201ENST00000384569 71 ntBASIC6.32□□□□□ -1.4
TOP1P11387 OR4K12P-201ENST00000406538 961 ntBASIC6.32□□□□□ -1.4
TOP1P11387 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.32□□□□□ -1.4
TOP1P11387 RNA5SP487-201ENST00000410186 122 ntBASIC6.32□□□□□ -1.4
TOP1P11387 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.32□□□□□ -1.4
TOP1P11387 AL133482.1-201ENST00000415988 498 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms