Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFRAP16234 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFRAP16234 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 AC092681.1-201ENST00000297369 291 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDGFRAP16234 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 RNU6-249P-201ENST00000363016 102 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 MIR551A-201ENST00000385042 96 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 U3.25-201ENST00000391209 220 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFRAP16234 AC002524.1-201ENST00000411687 547 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFRAP16234 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFRAP16234 AC079355.1-201ENST00000421770 223 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 AL133173.1-201ENST00000423458 397 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFRAP16234 AL450023.1-201ENST00000450868 751 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 AC007386.1-201ENST00000455212 582 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFRAP16234 PSAT1P4-201ENST00000466500 526 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 RN7SL197P-201ENST00000466981 299 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 RN7SL188P-201ENST00000469842 285 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 RN7SL583P-201ENST00000475692 287 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 AL136038.1-201ENST00000497246 351 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFRAP16234 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFRAP16234 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.81□□□□□ -1.48
PDGFRAP16234 RBM22P12-201ENST00000567098 1255 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFRAP16234 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 AC079791.1-201ENST00000605356 973 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 FAM72A-208ENST00000607379 1139 ntBASIC5.81□□□□□ -1.48
PDGFRAP16234 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFRAP16234 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFRAP16234 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFRAP16234 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PDGFRAP16234 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFRAP16234 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 AC007938.2-201ENST00000604666 2634 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PDGFRAP16234 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFRAP16234 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.8□□□□□ -1.48
PDGFRAP16234 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFRAP16234 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFRAP16234 AC006484.1-201ENST00000435086 1884 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDGFRAP16234 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDGFRAP16234 SNORA51.1-201ENST00000363243 140 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 RN7SKP6-201ENST00000364795 319 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PDGFRAP16234 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFRAP16234 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDGFRAP16234 U3.28-201ENST00000391249 210 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.8□□□□□ -1.48
PDGFRAP16234 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDGFRAP16234 RN7SL466P-201ENST00000497546 295 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 AC011411.1-201ENST00000509592 876 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFRAP16234 OR4A17P-201ENST00000526032 904 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 AL589674.2-201ENST00000604304 337 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 PPATP2-201ENST00000605635 508 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFRAP16234 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 AC007683.2-201ENST00000624681 714 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PDGFRAP16234 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFRAP16234 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFRAP16234 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFRAP16234 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
PDGFRAP16234 AL121839.2-201ENST00000565058 6943 ntBASIC5.8□□□□□ -1.48
PDGFRAP16234 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms