Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LMO3Q8TAP4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
LMO3Q8TAP4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.78□□□□□ -1.48
LMO3Q8TAP4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.48
LMO3Q8TAP4 AC079298.1-201ENST00000625026 1619 ntBASIC5.77□□□□□ -1.48
LMO3Q8TAP4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 SNORA17A-201ENST00000391185 133 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC079809.1-201ENST00000415468 276 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 HYALP1-201ENST00000417674 1279 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 UBE2V2P1-201ENST00000434717 398 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 RPL5P25-201ENST00000441148 775 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 RPS12P31-201ENST00000491419 398 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC026688.1-201ENST00000520639 1168 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 YWHABP2-201ENST00000540201 713 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 RBM22P1-201ENST00000578589 1214 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 FAM72A-208ENST00000607379 1139 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC007204.2-201ENST00000615022 616 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC253576.2-201ENST00000618815 580 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 HPVC1-201ENST00000629899 1198 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 SNORA17.5-201ENST00000630429 132 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 KARSP1-201ENST00000451871 1752 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 AC027279.1-201ENST00000568885 4284 ntBASIC5.77□□□□□ -1.49
LMO3Q8TAP4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.77□□□□□ -1.49
LMO3Q8TAP4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 RNA5SP319-201ENST00000362768 119 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 RNU1-146P-201ENST00000364015 165 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 SNORA48.4-201ENST00000391089 134 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 NAP1L4P2-201ENST00000425958 899 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 DSTNP5-201ENST00000427921 523 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC002069.1-201ENST00000429649 1159 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 RPL19P16-201ENST00000433839 588 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 RPS26P41-201ENST00000450370 284 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC100832.1-201ENST00000471945 383 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 RN7SL717P-201ENST00000478343 297 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC016559.2-201ENST00000510759 359 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC126177.5-201ENST00000549599 178 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC009712.1-201ENST00000564938 316 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC005341.1-201ENST00000571086 708 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC011458.1-201ENST00000604034 617 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 SUGT1P3-202ENST00000604259 383 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AL589674.2-201ENST00000604304 337 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AL162431.4-201ENST00000604674 411 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AL357153.4-201ENST00000620487 1016 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC026124.2-201ENST00000621847 656 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 AC023510.2-201ENST00000622162 746 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 MIR8080-201ENST00000622224 89 ntBASIC5.76□□□□□ -1.49
LMO3Q8TAP4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms