Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 RPS23P9-201ENST00000448848 438 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AL035090.1-201ENST00000454835 332 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 RPS4XP1-201ENST00000482189 787 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AC072052.1-201ENST00000496556 306 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC4P09017 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 HIGD1AP14-201ENST00000507617 282 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AC109464.1-201ENST00000511091 819 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AC091912.1-201ENST00000511351 248 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 RNA5SP92-201ENST00000516437 110 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 OR10G5P-201ENST00000532733 358 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC4P09017 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 OOSP1P2-201ENST00000579644 351 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 RN7SL356P-201ENST00000582228 248 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC4P09017 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC4P09017 AC090527.3-201ENST00000619041 548 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC4P09017 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC4P09017 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC4P09017 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC4P09017 OR55B1P-203ENST00000641518 2602 ntBASIC5.34□□□□□ -1.55
HOXC4P09017 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC4P09017 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC4P09017 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC4P09017 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.34□□□□□ -1.56
HOXC4P09017 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.34□□□□□ -1.56
HOXC4P09017 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC4P09017 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC4P09017 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC4P09017 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC4P09017 AC239868.2-201ENST00000564237 4527 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC4P09017 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC4P09017 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC4P09017 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC4P09017 AC092681.1-201ENST00000297369 291 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 DBIP1-201ENST00000401435 260 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 RN7SKP278-201ENST00000410504 342 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 RPL35AP24-201ENST00000413846 330 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC4P09017 BX119904.3-201ENST00000428194 957 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 AC005033.1-201ENST00000428904 813 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC4P09017 LYPLA1P1-201ENST00000434514 622 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC4P09017 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC4P09017 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC4P09017 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
HOXC4P09017 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 RBM22P1-201ENST00000578589 1214 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC4P09017 AC069307.1-201ENST00000602820 447 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 AC095055.1-201ENST00000603472 1113 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 AL139124.1-201ENST00000609123 421 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 AC018445.2-201ENST00000622987 260 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC4P09017 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC4P09017 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC4P09017 AC020633.1-201ENST00000468439 2247 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC4P09017 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC4P09017 AC018809.2-201ENST00000602436 3823 ntBASIC5.33□□□□□ -1.56
HOXC4P09017 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC4P09017 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
HOXC4P09017 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC4P09017 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC4P09017 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXC4P09017 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXC4P09017 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC4P09017 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms