Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC010266.2-201ENST00000564741 3255 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC026523.2-201ENST00000625039 7739 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC009962.1-201ENST00000567327 3813 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AL355488.2-201ENST00000609909 2850 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 RNA5SP46-201ENST00000362370 120 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 RNA5SP242-201ENST00000364171 118 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 OR2AT2P-201ENST00000413438 905 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 SNRPFP2-201ENST00000440710 251 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AP000281.1-201ENST00000444036 316 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 FCF1P7-201ENST00000451185 558 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 YWHAEP1-201ENST00000453697 763 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 OR2AF1P-201ENST00000454899 889 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC023141.9-201ENST00000458734 412 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 RN7SL717P-201ENST00000478343 297 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC109481.1-201ENST00000509173 282 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AP002981.1-201ENST00000517692 975 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC016839.1-201ENST00000578162 867 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC092944.2-201ENST00000605443 889 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 AC005618.4-201ENST00000625053 554 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 LINC02019-201ENST00000608605 2060 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 MT-RNR2-201ENST00000387347 1559 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 MTND5P23-201ENST00000430812 1655 ntBASIC5.28□□□□□ -1.56
ATG4BQ9Y4P1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC005005.4-201ENST00000623789 16698 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 RN7SKP293-201ENST00000411389 296 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 RPSAP35-201ENST00000413753 818 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC007161.1-204ENST00000423039 460 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC002504.1-201ENST00000438281 691 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 LINC02210-201ENST00000444561 288 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AL450996.1-201ENST00000445574 1202 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 RN7SL72P-201ENST00000460697 269 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC138866.2-201ENST00000508650 584 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC111000.6-201ENST00000514471 709 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 OR5AM1P-201ENST00000532136 1032 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 MRPS21P7-201ENST00000566937 238 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AP000919.1-201ENST00000582850 985 ntBASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4BQ9Y4P1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms